22679 CbiO
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22679 chr_5 CbiO 857606 859136 - CbiO

Synonyms

NCBI ID Ensembl Genomes exon ID
7449602 Thaps22679.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0198

Most Highly Correlated Transcripts

11490

hypothetical protein
0.9293

7588

hypothetical protein
0.9263

33895

GlcD
0.9218

30701

PRK05279
0.9213

34824

FtsH_fam
0.9205

6481

hypothetical protein
0.92

17582

HAD-SF-IIA-hyp3
0.9198

261400

NA
0.9163

22507

hypothetical protein
0.9154

9570

HECTc
0.9134

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 62.6978 1.24E-11 3 - 91 superfamily 266551
ABC_ATPase superfamily ATP-binding cassette transporter nucleotide-binding domain; ABC transporters are a large family of... - 62.6978 1.24E-11 3 - 91 superfamily 266551
CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism] - 95.4007 1.15E-22 195 - 449 multi-dom 224047

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45404 PHATRDRAFT_45404 246873 318193 106553 Not available Not available 319379

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005524 GO:0016887 GO:0000166 GO:0017111 -

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0016887

ATPase activity

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.
GO Category: 
MF

GO:0000166

nucleotide binding

Details: 
Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO Category: 
MF

GO:0017111

nucleoside-triphosphatase activity

Details: 
Catalysis of the reaction: a nucleoside triphosphate + H2O = nucleoside diphosphate + phosphate.
GO Category: 
MF

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