22863 COG1026
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22863 chr_5 COG1026 1803054 1807024 + COG1026

Synonyms

NCBI ID Ensembl Genomes exon ID
7445226 Thaps22863.4, Thaps22863.2, Thaps22863.1, Thaps22863.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0028

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0160
 0.28

Most Highly Correlated Transcripts

270338

hypothetical protein
0.9088

4108

hypothetical protein
0.903

262510

Alg6_Alg8 superfamily
0.8994

37288

PLN02487
0.893

bd1893

(bd1893) NA
0.8922

bd1765

(bd1765) NA
0.8906

30851

(CLPC2) clpA
0.8856

bd1949

(bd1949) NA
0.8855

bd1820

(bd1820) Fasciclin
0.8817

bd1078

(bd1078) NA
0.8812

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
M16C_assoc superfamily Peptidase M16C associated; This domain appears in eukaryotes as well as bacteria and tends to be... - 184.355 6.38E-52 655 - 918 superfamily 116948
Peptidase_M16_C superfamily Peptidase M16 inactive domain; Peptidase M16 consists of two structurally related domains. One is... - 97.1613 1.47E-22 391 - 574 superfamily 253075
Peptidase_M16_C superfamily Peptidase M16 inactive domain; Peptidase M16 consists of two structurally related domains. One is... - 97.1613 1.47E-22 391 - 574 superfamily 253075
COG1026 Predicted Zn-dependent peptidases, insulinase-like [General function prediction only] - 732.987 0 196 - 1203 multi-dom 223957

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_232 PHATRDRAFT_232 Not available Not available 428226 Not available Not available 354494

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004222 GO:0006508 -

GO:0004222

metalloendopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

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