22947 zf-UBR
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
22947 chr_6 zf-UBR 15654 25528 + zf-UBR
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0413
hypothetical protein
0.9458
hypothetical protein
0.9316
hypothetical protein
0.9286
hypothetical protein
0.9265
COG3899
0.9265
PDEase_I
0.9196
hypothetical protein
0.9175
Piwi-like superfamily
0.9173
hypothetical protein
0.9169
Dynein_heavy superfamily
0.9153
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
zf-UBR Putative zinc finger in N-recognin (UBR box); This region is found in E3 ubiquitin ligases that... cl19744 107.071 1.31E-26 511 - 580 specific 251157
zf-UBR superfamily Putative zinc finger in N-recognin (UBR box); This region is found in E3 ubiquitin ligases that... - 107.071 1.31E-26 511 - 580 superfamily 268097
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_40578 PHATRDRAFT_40578 146297 224722 239450 Not available AT5G02310.1 495013
KEGG description KEGG Pathway
Not available Not available
GO:0005351 GO:0009401 GO:0004842 GO:0006512 -

sugar:hydrogen symporter activity

Details: 
Catalysis of the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: sugar(out) + H+(out) = sugar(in) + H+(in).
GO Category: 
MF

phosphoenolpyruvate-dependent sugar phosphotransferase system

Details: 
The uptake and phosphorylation of specific carbohydrates from the extracellular environment; uptake and phosphorylation are coupled, making the PTS a link between the uptake and metabolism of sugars; phosphoenolpyruvate is the original phosphate donor; phosphoenolpyruvate passes the phosphate via a signal transduction pathway, to enzyme 1 (E1), which in turn passes it on to the histidine protein, HPr; the next step in the system involves sugar-specific membrane-bound complex, enzyme 2 (EII), which transports the sugar into the cell; it includes the sugar permease, which catalyzes the transport reactions; EII is usually divided into three different domains, EIIA, EIIB, and EIIC.
GO Category: 
BP

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

NA

Details: 
NA
GO Category: 
NA
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