22996 Ntn_hydrolase superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
22996 chr_6 Ntn_hydrolase superfamily 388609 390245 + Ntn_hydrolase superfamily
NCBI ID Ensembl Genomes exon ID
7448422 Thaps22996.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0113
TRX_family
0.9169
(bd446) HrpA
0.9158
MFS
0.9033
PRK09427
0.9029
hypothetical protein
0.8997
PRK05279
0.8989
hypothetical protein
0.8982
hypothetical protein
0.8982
PP2Cc
0.8894
hypothetical protein
0.8857
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ntn_hydrolase superfamily The Ntn hydrolases (N-terminal nucleophile) are a diverse superfamily of of enzymes that are... - 173.537 4.12E-51 174 - 401 superfamily 260443
PRE1 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover,... - 125.103 5.26E-33 171 - 418 multi-dom 223711
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 141769 Not available Not available Not available Not available Not available
KEGG description KEGG Pathway
Not available Not available
GO:0004298 GO:0005839 GO:0006511 GO:0004299 -

threonine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal peptide bonds in a polypeptide chain by a mechanism in which the hydroxyl group of a threonine residue at the active center acts as a nucleophile.
GO Category: 
MF

proteasome core complex

Details: 
A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex.
GO Category: 
CC

ubiquitin-dependent protein catabolic process

Details: 
The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of a ubiquitin group, or multiple ubiquitin groups, to the protein.
GO Category: 
BP

NA

Details: 
NA
GO Category: 
NA
Log in to post comments