Thaps_hclust_0113 Hierarchical Clustering
Thalassiosira pseudonana

Cluster Plots

Cluster Plot Conditions Plot Dendrogram

GO Enrichment

GO ID Go Term p-value q-value Cluster
GO:0051341 regulation of oxidoreductase activity 0.00352137 1 Thaps_hclust_0113
GO:0007585 respiratory gaseous exchange 0.00784149 1 Thaps_hclust_0113
GO:0046168 glycerol-3-phosphate catabolism 0.0117404 1 Thaps_hclust_0113
GO:0006072 glycerol-3-phosphate metabolism 0.0156247 1 Thaps_hclust_0113
GO:0015969 guanosine tetraphosphate metabolism 0.0156247 1 Thaps_hclust_0113
GO:0006461 protein complex assembly 0.0271911 1 Thaps_hclust_0113
GO:0016567 protein ubiquitination 0.037637 1 Thaps_hclust_0113
GO:0008033 tRNA processing 0.0685095 1 Thaps_hclust_0113
GO:0006118 electron transport 0.0830473 1 Thaps_hclust_0113
GO:0006629 lipid metabolism 0.108162 1 Thaps_hclust_0113

Members

444 : zinc_ribbon_6
11486 : hypothetical protein
22742 : hypothetical protein
33829 : Ycf34 superfamily
926 : hypothetical protein
18503 : PDI_a_family
22830 : Choline_transpo
34018 : RPN7
1747 : hypothetical protein
20892 : hypothetical protein
22996 : Ntn_hydrolase superfamily
37596 : SpoT
2145 : hypothetical protein
20993 : hslU
23126 : hypothetical protein
39038 : DUS_like_FMN
4829 : hypothetical protein
20998 : HOOK
23148 : PUB
40073 : gpsA
5116 : hypothetical protein
21341 : hypothetical protein
25127 : hypothetical protein
42992 : (AOX2) AOX
6052 : Nop superfamily
21734 : DnaJ-X superfamily
25179 : (Tp_CCH7) COG5152
261702 : ACD_sHsps-like
6809 : hypothetical protein
21965 : PDI_a_ERp38
28523 : RagC_like
263182 : DUF1350 superfamily
8673 : hypothetical protein
22097 : hypothetical protein
32029 : Sterol_MT_C superfamily
263354 : Fer4_NifH superfamily
10907 : hypothetical protein
22443 : hypothetical protein
32459 : PspA
264339 : steroid binding protein 2

Conditions

Condition Condition Difference FDR
diel_light_vs_dark diel_light_vs_dark 0.231 0.102
lowFe_KTKB_Day3 lowFe_KTKB_Day3 0.060 0.779
lowFe_KTKB_Day5 lowFe_KTKB_Day5 0.227 0.103
BaP BaP 1.800 0.00037
exponential_vs_stationary_24highlight exponential_vs_stationary_24highlight 0.111 0.136
co2_elevated_stat_arrays co2_elevated_stat_arrays 0.019 0.949
lowtemp_TMEVA lowtemp_TMEVA 0.149 0.439
highpH_TMEVA highpH_TMEVA 0.669 0.000725
co2_elevated_expo_arrays co2_elevated_expo_arrays 0.076 0.799
lowFe_TMEVA lowFe_TMEVA 0.036 0.933
exponential_vs_stationary_24light exponential_vs_stationary_24light 0.192 0.479
lowN_TMEVA lowN_TMEVA -0.145 0.683
diel_exponential_vs_stationary diel_exponential_vs_stationary -0.078 0.591
lowSi_TMEVA lowSi_TMEVA -0.464 0.199
highlight_arrays highlight_arrays 0.092 0.465

Motifs

MEME Output