23040 DUF1501 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23040 chr_6 DUF1501 superfamily 566834 575814 + DUF1501 superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0416

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0076
 0.36

Most Highly Correlated Transcripts

4047

hypothetical protein
0.9219

4050

hypothetical protein
0.8814

8909

hypothetical protein
0.8765

bd415

(bd415) arom_aa_hydroxylase superfamily
0.8607

bd690

(bd690) NA
0.8549

22071

Ion_trans
0.8543

bd1841

(bd1841) CAP10 superfamily
0.8534

6295

hypothetical protein
0.8533

24367

hypothetical protein
0.8525

5763

ERCC4
0.8522

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DUF1501 superfamily Protein of unknown function (DUF1501); This family contains a number of hypothetical bacterial... - 154.231 2.33E-39 2220 - 2620 superfamily 268208
DUF1800 superfamily Protein of unknown function (DUF1800); This is a family of large bacterial proteins of unknown... - 115.049 1.43E-26 1893 - 2058 superfamily 268242
DUF1800 superfamily Protein of unknown function (DUF1800); This is a family of large bacterial proteins of unknown... - 115.049 1.43E-26 1893 - 2058 superfamily 268242

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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