23411 (Tp_HSF_2.7g) regulator [Rayko]
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23411 chr_7 (Tp_HSF_2.7g) regulator [Rayko] 603892 606247 + regulator [Rayko]

Synonyms

NCBI ID Ensembl Genomes exon ID
7449179 Thaps23411.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0494

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0112
 0.40

Most Highly Correlated Transcripts

bd388

(bd388) COG3899
0.8627

263298

Chitin_synth_C
0.8227

bd1891

(bd1891) COG3899
0.8041

bd1749

(bd1749) NA
0.7864

263301

Chitin_synth_C
0.7861

25825

hypothetical protein
0.7779

261705

0.7761

262149

Cyt-b5
0.7743

3006

hypothetical protein
0.7718

5880

hypothetical protein
0.7659

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003700 GO:0005634 GO:0006355 GO:0003677 -

GO:0003700

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

Add comment

Log in to post comments