bd388 (bd388) COG3899
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
bd388 bd_4x130 (bd388) COG3899 3224 5618 + COG3899

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0459

Most Highly Correlated Transcripts

261705

0.9343

17193

HP_PGM_like
0.9139

22002

hypothetical protein
0.886

22372

HMGB-UBF_HMG-box
0.8703

23370

PKc_like superfamily
0.87

24353

hypothetical protein
0.8677

7367

hypothetical protein
0.8676

23411

(Tp_HSF_2.7g) regulator [Rayko]
0.8627

1481

hypothetical protein
0.8622

8798

CHD
0.8621

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA_16 AAA ATPase domain; This family of domains contain a P-loop motif that is characteristic of the AAA... cl18944 74.8065 1.67E-15 6 - 201 specific 257559
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 74.8065 1.67E-15 6 - 201 superfamily 267297
COG3899 Predicted ATPase [General function prediction only] - 218.807 9.51E-61 7 - 561 multi-dom 226415

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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