23656 (Tp_AP2-EREBP7) regulator [Rayko]
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23656 chr_8 (Tp_AP2-EREBP7) regulator [Rayko] 53129 54852 + regulator [Rayko]

Synonyms

NCBI ID Ensembl Genomes exon ID
7452396 Thaps23656.2, Thaps23656.1, Thaps23656.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0095

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0207
 0.30

Most Highly Correlated Transcripts

7355

hypothetical protein
0.9248

35279

(H4_2) H4
0.9039

6947

PLN00158
0.8513

37432

PTZ00018
0.8476

37309

PLN00158
0.8305

4108

hypothetical protein
0.8279

33270

PLN00157
0.8265

6948

PLN00157
0.8208

5734

hypothetical protein
0.8204

3183

PTZ00018
0.8147

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003700 GO:0005634 GO:0006355 -

GO:0003700

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

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