23665 (HSF7) HSF
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23665 chr_8 (HSF7) HSF 101902 103221 + HSF

Synonyms

NCBI ID Ensembl Genomes exon ID
7443444 Thaps23665.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0463

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0111
 0.37

Most Highly Correlated Transcripts

269325

(Tp_HSF_2.6c) HSF
0.8867

2524

hypothetical protein
0.8588

1412

TraB superfamily
0.8571

bd1844

(bd1844) NA
0.8529

bd1821

(bd1821) NA
0.8271

8974

hypothetical protein
0.8227

21774

hypothetical protein
0.8197

6636

Glyco_hydro_18
0.8094

12149

hypothetical protein
0.8074

23376

hypothetical protein
0.7953

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HSF heat shock factor; heat shock factor. cl12113 76.1708 6.61E-17 145 - 236 specific 214654
HSF_DNA-bind superfamily HSF-type DNA-binding; HSF-type DNA-binding. - 76.1708 6.61E-17 145 - 236 superfamily 264552

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003700 GO:0005634 GO:0006355 GO:0003677 -

GO:0003700

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

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