23697 Smc
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23697 chr_8 Smc 255288 262958 - Smc

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0196

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0024
 0.39

Most Highly Correlated Transcripts

264833

Lig
0.8636

31609

MCM
0.8593

bd392

(bd392) DEXDc
0.8504

22292

Smc
0.8453

2333

hypothetical protein
0.8444

12899

AAA
0.8435

24877

hypothetical protein
0.8251

5079

TRM13 superfamily
0.8214

23753

hypothetical protein
0.8197

24873

hypothetical protein
0.8182

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play... cl02542 63.7185 7.60E-12 230 - 288 specific 99751
DnaJ superfamily DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play... - 63.7185 7.60E-12 230 - 288 superfamily 261333
Smc Chromosome segregation ATPases [Cell division and chromosome partitioning] - 87.4623 3.12E-17 1315 - 2112 multi-dom 224117

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006457 GO:0031072 GO:0051082 GO:0008570 -

GO:0006457

protein folding

Details: 
The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO Category: 
BP

GO:0031072

heat shock protein binding

Details: 
Interacting selectively and non-covalently with a heat shock protein, any protein synthesized or activated in response to heat shock.
GO Category: 
MF

GO:0051082

unfolded protein binding

Details: 
Interacting selectively and non-covalently with an unfolded protein.
GO Category: 
MF

GO:0008570

NA

Details: 
NA
GO Category: 
NA

Add comment

Log in to post comments