23762 CAF1 superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
23762 chr_8 CAF1 superfamily 595462 598095 - CAF1 superfamily
NCBI ID Ensembl Genomes exon ID
7445604 Thaps23762.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0290
(bd1652) ABC_ATPase superfamily
0.9151
AAA
0.9011
hypothetical protein
0.8866
Thioredoxin_like superfamily
0.8758
Aldolase_II superfamily
0.8745
(bd974) DUF751
0.8728
SAICAR_synt_Sc
0.8726
FBPase
0.8693
PRK14329
0.8688
Methyltransf_32
0.8669
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CAF1 superfamily CAF1 family ribonuclease; The major pathways of mRNA turnover in eukaryotes initiate with... - 71.8971 4.09E-14 490 - 636 superfamily 248145
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48338 PHATRDRAFT_48338 183679 323770 Not available Not available Not available Not available
KEGG description KEGG Pathway
RNA degradation map03018
GO:0005634 GO:0016481 GO:0016564 GO:0004535 -

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

NA

Details: 
NA
GO Category: 
NA

NA

Details: 
NA
GO Category: 
NA

poly(A)-specific ribonuclease activity

Details: 
Catalysis of the exonucleolytic cleavage of poly(A) to 5'-AMP.
GO Category: 
MF
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