23856 FANC superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23856 chr_8 FANC superfamily 1054571 1060335 + FANC superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0373

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0037
 0.54

Most Highly Correlated Transcripts

bd1658

(bd1658) NA
0.9012

bd1863

(bd1863) NA
0.8991

bd1160

(bd1160) Chloroa_b-bind superfamily
0.8824

bd1306

(bd1306) NA
0.8725

bd1078

(bd1078) NA
0.8681

bd1820

(bd1820) Fasciclin
0.8677

bd208

(bd208) DUF3529
0.8662

22506

A_NRPS
0.8652

bd1387

(bd1387) psbE
0.857

bd1403

(bd1403) NA
0.8548

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
FANC superfamily Fanconi anemia ID complex proteins FANCI and FANCD2; The Fanconi anemia ID complex consists of two... - 373.182 4.82E-108 175 - 1648 superfamily 266500

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 110761 Not available AT4G14970.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004553 GO:0005975 -

GO:0004553

hydrolase activity, hydrolyzing O-glycosyl compounds

Details: 
Catalysis of the hydrolysis of any O-glycosyl bond.
GO Category: 
MF

GO:0005975

carbohydrate metabolic process

Details: 
The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO Category: 
BP

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