23939 MORN superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23939 chr_9 MORN superfamily 277698 282092 + MORN superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7443503 Thaps23939.1, Thaps23939.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0438

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0219
 0.41

Most Highly Correlated Transcripts

23366

hypothetical protein
0.9026

6734

hypothetical protein
0.9004

5915

hypothetical protein
0.893

22266

hypothetical protein
0.8867

5595

hypothetical protein
0.8833

22288

hypothetical protein
0.8809

41328

hypothetical protein
0.8804

5604

hypothetical protein
0.8758

22128

DENN
0.8736

25080

hypothetical protein
0.8733

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MORN superfamily MORN repeat; The MORN (Membrane Occupation and Recognition Nexus) repeat is found in multiple... - 67.8412 7.11E-13 1282 - 1378 superfamily 265453

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available 175094 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003700 GO:0005622 GO:0006355 -

GO:0003700

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

GO:0005622

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

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