24000 DENN superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24000 chr_9 DENN superfamily 645141 649847 - DENN superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7453045 Thaps24000.2, Thaps24000.3, Thaps24000.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0483

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0115
 0.37

Most Highly Correlated Transcripts

4146

hypothetical protein
0.8478

bd1749

(bd1749) NA
0.8384

270222

0.8357

bd1891

(bd1891) COG3899
0.8311

25781

hypothetical protein
0.8077

7336

hypothetical protein
0.8059

38973

RabGAP-TBC
0.803

7335

hypothetical protein
0.8015

22339

U-box superfamily
0.7884

bd739

(bd739) NA
0.7846

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DENN superfamily DENN (AEX-3) domain; DENN (after differentially expressed in neoplastic vs normal cells) is a... - 122.286 4.45E-31 431 - 604 superfamily 264408
uDENN Domain always found upstream of DENN domain, found in a variety of signalling proteins; The uDENN... cl04085 68.9005 1.28E-13 334 - 399 specific 214824
uDENN superfamily uDENN domain; This region is always found associated with pfam02141. It is predicted to form an all... - 68.9005 1.28E-13 334 - 399 superfamily 262011

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 204005 Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005524 GO:0006810 GO:0016020 GO:0042626 -

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0042626

ATPase activity, coupled to transmembrane movement of substances

Details: 
Catalysis of the reaction: ATP + H2O = ADP + phosphate, to directly drive the active transport of a substance across a membrane.
GO Category: 
MF

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