24084 TCP1_delta
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24084 chr_9 TCP1_delta 1113898 1116314 + TCP1_delta

Synonyms

NCBI ID Ensembl Genomes exon ID
7451006 Thaps24084.1, Thaps24084.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0155

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0114
 0.48

Most Highly Correlated Transcripts

bd1465

(bd1465) PKc_like superfamily
0.9494

25040

NA
0.8999

41005

odpB
0.8986

30981

NADB_Rossmann superfamily
0.8962

4612

hypothetical protein
0.8908

262977

NA
0.8899

bd624

(bd624) Glyco_transf_34 superfamily
0.889

268343

NA
0.8866

6983

hypothetical protein
0.8864

5105

hypothetical protein
0.886

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TCP1_delta TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit. Chaperonins are involved in... cl02777 810.362 0 15 - 533 specific 239454
chaperonin_like superfamily chaperonin_like superfamily. Chaperonins are involved in productive folding of proteins. They share... - 810.362 0 15 - 533 superfamily 261443

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_30446 PHATRDRAFT_30446 237081 258516 463324 Cre05.g234639.t1.1 AT3G18190.1 315720

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005515 GO:0005524 GO:0044267 GO:0003763 -

GO:0005515

protein binding

Details: 
Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0044267

cellular protein metabolic process

Details: 
The chemical reactions and pathways involving a specific protein, rather than of proteins in general, occurring at the level of an individual cell. Includes cellular protein modification.
GO Category: 
BP

GO:0003763

NA

Details: 
NA
GO Category: 
NA

Add comment

Log in to post comments