24137 PTEN_C2Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
24137	chr_10	PTEN_C2	310130	312863	-	PTEN_C2

Synonyms

NCBI ID	Ensembl Genomes exon ID
7451071	Thaps24137.3, Thaps24137.4, Thaps24137.1, Thaps24137.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0438

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0089	0.36	110 0.00075

Most Highly Correlated Transcripts

23366 hypothetical protein 0.9041	8489 GlcNAc superfamily 0.8961	23051 hypothetical protein 0.8951	23514 hypothetical protein 0.8919	4322 PLN00113 0.8901	3926 COG6 superfamily 0.8864
6734 hypothetical protein 0.8864	268338 (FAO1) fadB 0.8859	11594 DUF2042 superfamily 0.8821	2593 ANK 0.8811

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PTEN_C2 superfamily		C2 domain of PTEN tumor-suppressor protein; This is the C2 domain-like domain, in greek key form,...	-	100.873	1.23E-24	326 - 476	superfamily	255967
PTEN_C2 superfamily		C2 domain of PTEN tumor-suppressor protein; This is the C2 domain-like domain, in greek key form,...	-	100.873	1.23E-24	326 - 476	superfamily	255967

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	229329	257915	437207	Not available	AT3G19420.1	313345

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0004721 GO:0006470 -

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