24347 COG3899
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24347 chr_11a COG3899 494210 498402 - COG3899

Synonyms

NCBI ID Ensembl Genomes exon ID
7448330 Thaps24347.4, Thaps24347.3, Thaps24347.1, Thaps24347.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0326

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9796

24618

hypothetical protein
0.9131

1216

hypothetical protein
0.9122

21190

SAC3_GANP
0.9115

22603

COG3899
0.9099

25451

AAA superfamily
0.9094

25342

hypothetical protein
0.9084

24489

TPR_12
0.9007

23582

hypothetical protein
0.8993

4862

Bromodomain superfamily
0.8992

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA_16 AAA ATPase domain; This family of domains contain a P-loop motif that is characteristic of the AAA... cl18944 68.6433 3.95E-13 298 - 521 specific 257559
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 68.6433 3.95E-13 298 - 521 superfamily 267297
COG3899 Predicted ATPase [General function prediction only] - 239.993 7.84E-66 298 - 1182 multi-dom 226415

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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