21190 SAC3_GANPThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
21190	chr_2	SAC3_GANP	543796	549693	-	SAC3_GANP

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448679	Thaps21190.1, Thaps21190.7, Thaps21190.3, Thaps21190.4, Thaps21190.6, Thaps21190.5, Thaps21190.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0232

Most Highly Correlated Transcripts

22252 hypothetical protein 0.9239	25270 hypothetical protein 0.912	24347 COG3899 0.9115	5698 Rad17 0.9108	8366 hypothetical protein 0.9064	21891 hypothetical protein 0.9036
12836 EEP superfamily 0.9035	23979 zf-HC5HC2H superfamily 0.9004	10753 hypothetical protein 0.9004	22621 hypothetical protein 0.8982

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SAC3_GANP		SAC3/GANP/Nin1/mts3/eIF-3 p25 family; This large family includes diverse proteins involved in large...	-	118.176	2.31E-29	565 - 878	multi-dom	251923

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_43680	PHATRDRAFT_43680	258590	324434	Not available	Not available	Not available	320063

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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