24361 PRK00142
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24361 chr_11a PRK00142 579461 581084 - PRK00142

Synonyms

NCBI ID Ensembl Genomes exon ID
7448348 Thaps24361.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0282

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0265
 0.39

Most Highly Correlated Transcripts

35527

PLN02327
0.8946

268986

(dhs1) DS
0.8743

268543

hypothetical protein
0.8648

29018

NMD3
0.8618

268745

hypothetical protein
0.8574

39022

COG2319
0.8564

22659

hypothetical protein
0.8523

17145

WBS_methylT
0.8436

36322

TrmA
0.841

263630

(MTS) tRNA_bind_EMAP-II_like
0.8382

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
RHOD superfamily Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese... - 104.969 5.13E-27 243 - 390 superfamily 260205
PRK00142 putative rhodanese-related sulfurtransferase; Provisional - 142.294 4.01E-38 19 - 493 multi-dom 234663

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_45955 PHATRDRAFT_45955 148425 253558 Not available Cre17.g719522.t1.2 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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