35527 PLN02327
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
35527 chr_7 PLN02327 988068 990298 - PLN02327

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0282

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0265
 0.39

Most Highly Correlated Transcripts

24361

PRK00142
0.8946

268986

(dhs1) DS
0.8705

39075

PRK09246
0.8667

33425

BMS1
0.8652

268331

WD40
0.8611

39022

COG2319
0.8571

2772

Utp14
0.8566

36322

TrmA
0.8552

bd1876

(bd1876) NatB_MDM20 superfamily
0.8534

24590

DUF663
0.8486

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GATase1_CTP_Synthase Type 1 glutamine amidotransferase (GATase1) domain found in Cytidine Triphosphate Synthetase; Type... cl00020 372.271 4.38E-126 287 - 543 specific 153217
GAT_1 superfamily Type 1 glutamine amidotransferase (GATase1)-like domain; Type 1 glutamine amidotransferase (GATase1... - 372.271 4.38E-126 287 - 543 superfamily 260141
CTP_synth_N CTP synthase N-terminus; This family consists of the N-terminal region of the CTP synthase protein... cl17203 481.975 1.78E-168 1 - 268 specific 253716
Fer4_NifH superfamily The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain.... - 481.975 1.78E-168 1 - 268 superfamily 266552
PLN02327 CTP synthase - 1038.06 0 1 - 557 multi-dom 215186

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 228514 Not available 73959 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0003824 GO:0003883 GO:0006221 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0003883

CTP synthase activity

Details: 
Catalysis of the reaction: ATP + UTP + NH3 = ADP + phosphate + CTP.
GO Category: 
MF

GO:0006221

pyrimidine nucleotide biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
GO Category: 
BP

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