24492 Lipase_3
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24492 chr_12 Lipase_3 518145 521302 + Lipase_3

Synonyms

NCBI ID Ensembl Genomes exon ID
7447547 Thaps24492.3, Thaps24492.2, Thaps24492.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0425

Most Highly Correlated Transcripts

22549

hypothetical protein
0.913

12836

EEP superfamily
0.9023

262157

E1_like_apg7
0.901

25619

hypothetical protein
0.9006

5153

hypothetical protein
0.8942

21410

hypothetical protein
0.8904

24489

TPR_12
0.8884

1197

RhaT
0.8878

24940

CAP10 superfamily
0.8875

24685

Glyco_tranf_GTA_type superfamily
0.8848

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di-... cl14883 102.169 5.12E-24 414 - 586 specific 238287
Lipase superfamily Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and... - 102.169 5.12E-24 414 - 586 superfamily 265473

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004806 GO:0006629 GO:0030001 GO:0046872 GO:0003824 -

GO:0004806

triglyceride lipase activity

Details: 
Catalysis of the reaction: triacylglycerol + H2O = diacylglycerol + a carboxylate.
GO Category: 
MF

GO:0006629

lipid metabolic process

Details: 
The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
GO Category: 
BP

GO:0030001

metal ion transport

Details: 
The directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0046872

metal ion binding

Details: 
Interacting selectively and non-covalently with any metal ion.
GO Category: 
MF

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

Add comment

Log in to post comments