24659 DnaQ_like_exo superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24659 chr_13 DnaQ_like_exo superfamily 481033 482412 - DnaQ_like_exo superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7445765 Thaps24659.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0108

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0103
 0.42

Most Highly Correlated Transcripts

bd1840

(bd1840) NA
0.947

bd690

(bd690) NA
0.9381

bd415

(bd415) arom_aa_hydroxylase superfamily
0.9355

bd1839

(bd1839) NA
0.9312

bd1756

(bd1756) NA
0.9266

bd1841

(bd1841) CAP10 superfamily
0.9094

bd1934

(bd1934) NA
0.9091

bd643

(bd643) NA
0.9047

bd877

(bd877) NA
0.9003

bd410

(bd410) HNHc
0.8936

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DnaQ_like_exo superfamily DnaQ-like (or DEDD) 3'-5' exonuclease domain superfamily; The DnaQ-like... - 122.778 1.37E-33 47 - 193 superfamily 263941

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 196821 Not available Not available Cre03.g152425.t1.2 AT2G25910.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003676 GO:0005622 GO:0008408 -

GO:0003676

nucleic acid binding

Details: 
Interacting selectively and non-covalently with any nucleic acid.
GO Category: 
MF

GO:0005622

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

GO:0008408

3'-5' exonuclease activity

Details: 
Catalysis of the hydrolysis of ester linkages within nucleic acids by removing nucleotide residues from the 3' end.
GO Category: 
MF

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