24671 PRKCSH superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24671 chr_13 PRKCSH superfamily 541295 544476 + PRKCSH superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7447825 Thaps24671.3, Thaps24671.2, Thaps24671.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0187

Most Highly Correlated Transcripts

270222

0.9696

35136

NA
0.882

30701

PRK05279
0.8675

40200

TRX_reduct
0.8531

268443

SAICAR_synt_Sc
0.8418

25054

hypothetical protein
0.8353

13393

PLN02321
0.8275

4096

hypothetical protein
0.8253

8138

hypothetical protein
0.8179

5485

hypothetical protein
0.8167

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PRKCSH superfamily Glucosidase II beta subunit-like protein; The sequences found in this family are similar to a... - 81.8047 1.04E-17 674 - 793 superfamily 263041
PRKCSH-like Glucosidase II beta subunit-like; The sequences found in this family are similar to a region found... - 67.8913 6.44E-13 56 - 206 multi-dom 193472

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_54169 PHATR_54169 195791 326827 Not available Not available AT5G56360.1 514136

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004558 -

GO:0004558

alpha-glucosidase activity

Details: 
Catalysis of the hydrolysis of terminal, non-reducing alpha-(1->4)-linked alpha-D-glucose residues with release of alpha-D-glucose.
GO Category: 
MF

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