24694 DUF1800 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24694 chr_13 DUF1800 superfamily 699420 713257 - DUF1800 superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0198

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0049
 0.45

Most Highly Correlated Transcripts

25498

E3_UbLigase_R4 superfamily
0.8307

20865

DUF1162 superfamily
0.8158

261045

PI3Kc_like superfamily
0.8137

bd906

(bd906) NA
0.8069

29057

P-ATPase-V
0.8052

2182

CPSF_A
0.8013

24685

Glyco_tranf_GTA_type superfamily
0.8003

22843

hypothetical protein
0.7954

6378

hypothetical protein
0.7875

25297

Chorein_N
0.7858

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DUF1800 superfamily Protein of unknown function (DUF1800); This is a family of large bacterial proteins of unknown... - 121.983 1.59E-28 2642 - 2815 superfamily 268242
DUF1800 superfamily Protein of unknown function (DUF1800); This is a family of large bacterial proteins of unknown... - 121.983 1.59E-28 2642 - 2815 superfamily 268242
DUF1501 superfamily Protein of unknown function (DUF1501); This family contains a number of hypothetical bacterial... - 114.941 1.71E-26 3518 - 3926 superfamily 268208

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available 204058 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005488 GO:0006810 GO:0008289 -

GO:0005488

binding

Details: 
The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0008289

lipid binding

Details: 
Interacting selectively and non-covalently with a lipid.
GO Category: 
MF

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