24759 LRR_RI superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
24759	chr_14	LRR_RI superfamily	74722	76857	+	LRR_RI superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7451620	Thaps24759.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0432

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0014	0.46	2.6 6.6

Most Highly Correlated Transcripts

22782 hypothetical protein 0.8686	16295 FBPase 0.8579	35136 NA 0.8569	261400 NA 0.8565	9679 ABD superfamily 0.8512	23481 hypothetical protein 0.8509
16114 PLN02350 0.8409	24996 hypothetical protein 0.8387	23944 SPRY 0.8377	37497 cysE 0.8355

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
LRR_RI superfamily		Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue...	-	70.4621	2.03E-13	335 - 463	superfamily	238064

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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