24792 U-box superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24792 chr_14 U-box superfamily 235825 238667 - U-box superfamily

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0209

Most Highly Correlated Transcripts

22673

NA
0.9169

268908

Trans_IPPS_HH
0.9089

36669

TPT
0.9061

34158

DUF336 superfamily
0.8905

16075

tpt
0.8898

26991

GRX_GRXh_1_2_like
0.8896

38306

Chloroa_b-bind
0.888

268343

NA
0.8876

28326

lytB_ispH
0.8872

37934

GRX_PICOT_like
0.8861

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
U-box superfamily U-box domain; This domain is related to the Ring finger pfam00097 but lacks the zinc binding... - 60.7117 1.77E-11 56 - 115 superfamily 266741

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
36917 Not available Not available Not available 233000 Cre12.g507200.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000151 GO:0004842 GO:0016567 -

GO:0000151

ubiquitin ligase complex

Details: 
A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex.
GO Category: 
CC

GO:0004842

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

GO:0016567

protein ubiquitination

Details: 
The process in which one or more ubiquitin groups are added to a protein.
GO Category: 
BP

Add comment

Log in to post comments