24891 zf-CW
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24891 chr_14 zf-CW 699646 703824 + zf-CW

Synonyms

NCBI ID Ensembl Genomes exon ID
7441798 Thaps24891.4, Thaps24891.2, Thaps24891.1, Thaps24891.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0414

Most Highly Correlated Transcripts

23560

hypothetical protein
0.918

25270

hypothetical protein
0.9152

5760

SART-1
0.9137

12836

EEP superfamily
0.9126

24141

FH2 superfamily
0.9113

23469

Plus-3
0.9083

24604

hypothetical protein
0.9082

10398

hypothetical protein
0.908

22252

hypothetical protein
0.9079

25288

Sec6 superfamily
0.9066

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
zf-CW superfamily CW-type Zinc Finger; This domain appears to be a zinc finger. The alignment shows four conserved... - 65.5367 6.20E-13 800 - 844 superfamily 254236
zf-CW superfamily CW-type Zinc Finger; This domain appears to be a zinc finger. The alignment shows four conserved... - 65.5367 6.20E-13 800 - 844 superfamily 254236
zf-CW superfamily CW-type Zinc Finger; This domain appears to be a zinc finger. The alignment shows four conserved... - 65.5367 6.20E-13 800 - 844 superfamily 254236
zf-CW superfamily CW-type Zinc Finger; This domain appears to be a zinc finger. The alignment shows four conserved... - 65.5367 6.20E-13 800 - 844 superfamily 254236

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_43966 PHATR_43966 Not available 262239 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008270 GO:0004308 -

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0004308

exo-alpha-sialidase activity

Details: 
Catalysis of the hydrolysis of alpha-(2->3)-, alpha-(2->6)-, alpha-(2->8)-glycosidic linkages of terminal sialic residues in oligosaccharides, glycoproteins, glycolipids, colominic acid and synthetic substrates.
GO Category: 
MF

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