25337 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
25337 chr_18 hypothetical protein 216263 219149 + hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7442944 Thaps25337.3, Thaps25337.2, Thaps25337.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0105

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0056
 0.44

Most Highly Correlated Transcripts

10791

ATS1
0.9109

22941

plant_peroxidase_like
0.8909

25060

hypothetical protein
0.8853

25061

hypothetical protein
0.8591

24566

hypothetical protein
0.8385

25058

hypothetical protein
0.8339

11191

hypothetical protein
0.8184

25098

hypothetical protein
0.8177

30457

SrmB
0.8147

11418

hypothetical protein
0.7985

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0006306 GO:0008170 GO:0008766 GO:0016881 GO:0018169 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0006306

DNA methylation

Details: 
The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine.
GO Category: 
BP

GO:0008170

N-methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group to the nitrogen atom of an acceptor molecule.
GO Category: 
MF

GO:0008766

UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity

Details: 
Catalysis of the reaction: ATP + UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminoheptanedioate + D-alanyl-D-alanine = ADP + phosphate + UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-6-carboxy-L-lysyl-D-alanyl-D-alanine.
GO Category: 
MF

GO:0016881

acid-amino acid ligase activity

Details: 
Catalysis of the ligation of an acid to an amino acid via a carbon-nitrogen bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.
GO Category: 
MF

GO:0018169

ribosomal S6-glutamic acid ligase activity

Details: 
Catalysis of the posttranslational transfer of one or more glutamic acid residues to the C-terminus of ribosomal protein S6.
GO Category: 
MF

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