25402 (Lhcf10) fucoxanthin chl a/c light-harvesting protein, major type
Thalassiosira pseudonana

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
25402	chr_18	(Lhcf10) fucoxanthin chl a/c light-harvesting protein, major type	619410	620537	-	fucoxanthin chl a/c light-harvesting protein, major type

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450877	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0022

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0208	0.25	15 20

Most Highly Correlated Transcripts

bd1160 (bd1160) Chloroa_b-bind superfamily 0.9931	bd1820 (bd1820) Fasciclin 0.9926	23808 hypothetical protein 0.9899	4882 (Lhcr4) fucoxanthin chl a/c light-harvesting protein 0.9863	26246 (Lhcr3) fucoxanthin chl a/c light-harvesting protein 0.9838	11501 (FCP3) Chloroa_b-bind 0.9828
bd218 (bd218) Chloroa_b-bind superfamily 0.9822	24080 (Lhcr1) fucoxanthin chl a/c light-harvesting protein, lhcr type 0.9819	33606 Chloroa_b-bind superfamily 0.9797	3816 (Lhcr7) fucoxanthin chl a/c light-harvesting protein 0.9792

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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