4882 (Lhcr4) fucoxanthin chl a/c light-harvesting protein
Thalassiosira pseudonana

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
4882	chr_4	(Lhcr4) fucoxanthin chl a/c light-harvesting protein	2179164	2180287	-	fucoxanthin chl a/c light-harvesting protein

Synonyms

NCBI ID	Ensembl Genomes exon ID
7451388	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0022

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0223	0.11	0.0000034 0.000084

Most Highly Correlated Transcripts

4882 (Lhcr4) fucoxanthin chl a/c light-harvesting protein 1	bd1160 (bd1160) Chloroa_b-bind superfamily 0.9936	38122 Chloroa_b-bind superfamily 0.9905	3816 (Lhcr7) fucoxanthin chl a/c light-harvesting protein 0.9894	23808 hypothetical protein 0.9864	25402 (Lhcf10) fucoxanthin chl a/c light-harvesting protein, major type 0.9863
22747 (Lhcr10) fucoxanthin chlorophyll a/c light-harvesting protein 0.9855	26246 (Lhcr3) fucoxanthin chl a/c light-harvesting protein 0.9846	bd218 (bd218) Chloroa_b-bind superfamily 0.9844	bd1820 (bd1820) Fasciclin 0.9823

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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