25476 OTU
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
25476 chr_19a_19 OTU 318340 321796 + OTU

Synonyms

NCBI ID Ensembl Genomes exon ID
7446296 Thaps25476.2, Thaps25476.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0481

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0082
 0.46

Most Highly Correlated Transcripts

bd738

(bd738) NA
0.9273

bd1801

(bd1801) NA
0.9248

bd1877

(bd1877) NA
0.8994

25106

hypothetical protein
0.8844

bd1813

(bd1813) NA
0.8817

7335

hypothetical protein
0.873

bd1822

(bd1822) SCP superfamily
0.866

bd1802

(bd1802) NA
0.8573

bd692

(bd692) NA
0.854

bd739

(bd739) NA
0.8503

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
OTU OTU-like cysteine protease; This family is comprised of a group of predicted cysteine proteases,... cl19932 75.196 1.06E-15 953 - 1101 specific 251233
OTU superfamily OTU-like cysteine protease; This family is comprised of a group of predicted cysteine proteases,... - 75.196 1.06E-15 953 - 1101 superfamily 268285

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 250960 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003755 GO:0004600 GO:0030051 GO:0042027 -

GO:0003755

peptidyl-prolyl cis-trans isomerase activity

Details: 
Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).
GO Category: 
MF

GO:0004600

NA

Details: 
NA
GO Category: 
NA

GO:0030051

NA

Details: 
NA
GO Category: 
NA

GO:0042027

NA

Details: 
NA
GO Category: 
NA

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