25547 PTZ00121Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
25547	chr_19c_29	PTZ00121	151952	156498	-	PTZ00121

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444400	Thaps25547.4, Thaps25547.7, Thaps25547.5, Thaps25547.1, Thaps25547.2, Thaps25547.11, Thaps25547.12, Thaps25547.10, Thaps25547.6, Thaps25547.9, Thaps25547.3, Thaps25547.8

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0247

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0247	0.36	2.5 17

Most Highly Correlated Transcripts

23094 hypothetical protein 0.9172	20865 DUF1162 superfamily 0.8844	6086 hypothetical protein 0.8844	261045 PI3Kc_like superfamily 0.8779	261908 PLN02889 0.8707	12836 EEP superfamily 0.8703
6207 hypothetical protein 0.8698	25168 hypothetical protein 0.8695	24529 hypothetical protein 0.8691	21268 zf-CXXC 0.8667

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PTZ00121		MAEBL; Provisional	-	114.083	9.38E-26	561 - 1049	multi-dom	173412

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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