25574 NADB_Rossmann superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
25574 chr_20 NADB_Rossmann superfamily 63113 64772 + NADB_Rossmann superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7448481 Thaps25574.3, Thaps25574.1, Thaps25574.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0019

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0182
 0.48

Most Highly Correlated Transcripts

bd1150

(bd1150) PLN02433
0.9152

36235

p450 superfamily
0.8849

268592

VDE superfamily
0.8775

1136

hypothetical protein
0.8769

574

PRK05444
0.8726

4531

PKc_like superfamily
0.8711

22140

UFD1 superfamily
0.8696

1219

PAP_fibrillin superfamily
0.8674

6802

hypothetical protein
0.8663

268908

Trans_IPPS_HH
0.8615

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 251.668 9.13E-80 84 - 431 superfamily 263925
FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [... - 87.9509 5.17E-20 85 - 327 multi-dom 223959

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_43164 PHATRDRAFT_43164 159664 319615 210898 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0008152 GO:0016491 GO:0016630 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0016630

protochlorophyllide reductase activity

Details: 
Catalysis of the reaction: chlorophyllide a + NADP+ = protochlorophyllide + NADPH + H+.
GO Category: 
MF

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