25733 TRAM_LAG1_CLN8
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
25733 chr_22 TRAM_LAG1_CLN8 503889 505427 + TRAM_LAG1_CLN8

Synonyms

NCBI ID Ensembl Genomes exon ID
7442842 Thaps25733.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0214

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0271
 0.35

Most Highly Correlated Transcripts

1365

hypothetical protein
0.8963

4292

hypothetical protein
0.8902

35025

Lung_7-TM_R superfamily
0.8892

22842

hypothetical protein
0.8887

39278

ATP-synt_C
0.888

262201

PP2Cc
0.8847

2648

hypothetical protein
0.8819

789

S_TKc
0.8811

9490

hypothetical protein
0.8808

17214

PLN02512
0.8795

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TRAM_LAG1_CLN8 TLC domain; TLC domain. cl02759 99.278 3.30E-24 187 - 460 specific 252170
TRAM_LAG1_CLN8 superfamily TLC domain; TLC domain. - 99.278 3.30E-24 187 - 460 superfamily 261432

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available 565227

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016021 GO:0050291 -

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

GO:0050291

sphingosine N-acyltransferase activity

Details: 
Catalysis of the reaction: acyl-CoA + sphingosine = CoA + N-acylsphingosine.
GO Category: 
MF

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