260875 COG2220
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
260875 chr_1 COG2220 1067757 1068839 - COG2220

Synonyms

NCBI ID Ensembl Genomes exon ID
7445492 Thaps260875.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0249

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9259

31598

cyclophilin superfamily
0.9068

5624

hypothetical protein
0.9009

31412

NAD_bind_amino_acid_DH superfamily
0.8937

32782

MPN superfamily
0.8924

24525

hypothetical protein
0.8848

35314

GSH_Peroxidase
0.8826

36742

(KCT2) thiolase
0.8806

16295

FBPase
0.8805

34595

(PYR) PLN02527
0.8784

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
COG2220 Predicted Zn-dependent hydrolases of the beta-lactamase fold [General function prediction only] cl00446 165.386 2.52E-48 96 - 360 specific 225130
Lactamase_B superfamily Metallo-beta-lactamase superfamily; Metallo-beta-lactamase superfamily. - 165.386 2.52E-48 96 - 360 superfamily 260426

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 151604 Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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