260886 hypothetical protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
260886 chr_1 hypothetical protein 1145652 1146311 + hypothetical protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7446835 Thaps260886.2, Thaps260886.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0253

Most Highly Correlated Transcripts

3161

hypothetical protein
0.9159

8414

NA
0.911

4108

hypothetical protein
0.9108

34590

nt_trans superfamily
0.9065

10940

RRM_UHM_SPF45_PUF60
0.8989

12836

EEP superfamily
0.895

6710

hypothetical protein
0.8881

2580

AarF
0.8849

bd1077

(bd1077) NA
0.8805

4510

hypothetical protein
0.879

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47516 PHATRDRAFT_47516 272536 234275 Not available Not available AT2G26350.1 288411

KEGG

KEGG description KEGG Pathway
Peroxisome map04146

GO Terms

GO:0000151 GO:0004842 GO:0008270 GO:0016567 -

GO:0000151

ubiquitin ligase complex

Details: 
A protein complex that includes a ubiquitin-protein ligase and other proteins that may confer substrate specificity on the complex.
GO Category: 
CC

GO:0004842

ubiquitin-protein ligase activity

Details: 
Catalysis of the reaction: ATP + ubiquitin + protein lysine = AMP + diphosphate + protein N-ubiquityllysine.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016567

protein ubiquitination

Details: 
The process in which one or more ubiquitin groups are added to a protein.
GO Category: 
BP

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