260926 PLN00113Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
260926	chr_1	PLN00113	1383633	1384254	+	PLN00113

Synonyms

NCBI ID	Ensembl Genomes exon ID
7451463	Thaps260926.1, Thaps260926.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0092

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0220	0.24	18000 120

Most Highly Correlated Transcripts

5147 ANK 0.9697	1055 hypothetical protein 0.9693	10654 hypothetical protein 0.9681	24064 hypothetical protein 0.9648	1201 hypothetical protein 0.9598	7236 hypothetical protein 0.9597
4147 hypothetical protein 0.9575	11130 hypothetical protein 0.9573	1305 hypothetical protein 0.9541	36911 Rhomboid 0.9512

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PLN00113		leucine-rich repeat receptor-like protein kinase; Provisional	-	75.2696	4.46E-16	2 - 142	multi-dom	215061

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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