261126 DadAThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
261126	chr_1	DadA	2593146	2595085	+	DadA

Synonyms

NCBI ID	Ensembl Genomes exon ID
7447608	Thaps261126.4, Thaps261126.6, Thaps261126.3, Thaps261126.2, Thaps261126.1, Thaps261126.5

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0206

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0172	0.30	0.000047 3000

Most Highly Correlated Transcripts

4108 hypothetical protein 0.9429	6028 NA 0.9349	27986 LMBR1 superfamily 0.9348	260829 GalK 0.9249	21455 hypothetical protein 0.9225	18469 FkpA 0.9224
9772 TOPEUc 0.9195	13393 PLN02321 0.9174	16295 FBPase 0.9173	4674 zf-DHHC 0.9166

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
DadA		Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]	-	125.782	5.56E-32	151 - 531	multi-dom	223737

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_44549	PHATRDRAFT_44549	267942	203923	461482	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0008718 -

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