261132 (PDT1) PLN02517 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261132 chr_1 (PDT1) PLN02517 superfamily 2629705 2631941 + PLN02517 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7445508 Thaps261132.4, Thaps261132.3, Thaps261132.2, Thaps261132.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0196

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0048
 0.39

Most Highly Correlated Transcripts

11438

hypothetical protein
0.8693

269540

(CHC) Clathrin
0.864

12836

EEP superfamily
0.8533

bd392

(bd392) DEXDc
0.848

11294

XendoU
0.8465

8262

hypothetical protein
0.8357

25162

hypothetical protein
0.8214

33454

Ac_CoA_lig_AcsA
0.8168

261908

PLN02889
0.8136

24686

hypothetical protein
0.8126

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PLN02517 superfamily phosphatidylcholine-sterol O-acyltransferase - 344.05 5.14E-109 150 - 618 superfamily 178132
LCAT Lecithin:cholesterol acyltransferase; Lecithin:cholesterol acyltransferase (LCAT) is involved in... - 247.817 1.62E-75 167 - 606 multi-dom 251302

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_8860 PHATRDRAFT_8860 166543 239257 Not available Cre02.g106400.t1.1 AT3G44830.1 355873

KEGG

KEGG description KEGG Pathway
Glycerolipid metabolism map00561

GO Terms

GO:0004607 GO:0006629 GO:0046027 -

GO:0004607

phosphatidylcholine-sterol O-acyltransferase activity

Details: 
Catalysis of the reaction: phosphatidylcholine + a sterol = a sterol ester + 1-acylglycerophosphocholine.
GO Category: 
MF

GO:0006629

lipid metabolic process

Details: 
The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
GO Category: 
BP

GO:0046027

phospholipid:diacylglycerol acyltransferase activity

Details: 
Catalysis of the reaction: phospholipid + 1,2-diacylglycerol = lysophospholipid + triacylglycerol.
GO Category: 
MF

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