261158 calcium channel
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261158 chr_1 calcium channel 2866276 2868026 + calcium channel

Synonyms

NCBI ID Ensembl Genomes exon ID
7451490 Thaps261158.2, Thaps261158.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0416

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0249
 0.31

Most Highly Correlated Transcripts

bd410

(bd410) HNHc
0.942

bd1841

(bd1841) CAP10 superfamily
0.9236

bd1941

(bd1941) NA
0.9197

28651

(AAT1_1) PLN02644
0.9181

bd415

(bd415) arom_aa_hydroxylase superfamily
0.908

10379

hypothetical protein
0.9029

20816

PLPDE_IV superfamily
0.9026

24448

hypothetical protein
0.8968

25198

HA
0.8958

4482

hypothetical protein
0.8933

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_15329 PHATRDRAFT_15329 225157 181049 452741 Not available AT4G03560.1 306746

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005509 GO:0005261 GO:0006812 GO:0016020 GO:0005216 GO:0006811 -

GO:0005509

calcium ion binding

Details: 
Interacting selectively and non-covalently with calcium ions (Ca2+).
GO Category: 
MF

GO:0005261

cation channel activity

Details: 
Catalysis of the energy-independent passage of cations across a lipid bilayer down a concentration gradient.
GO Category: 
MF

GO:0006812

cation transport

Details: 
The directed movement of cations, atoms or small molecules with a net positive charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0005216

ion channel activity

Details: 
Catalysis of facilitated diffusion of an ion (by an energy-independent process) by passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism.
GO Category: 
MF

GO:0006811

ion transport

Details: 
The directed movement of charged atoms or small charged molecules into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

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