261201 Cwf_Cwc_15Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
261201	chr_2	Cwf_Cwc_15	154558	155535	-	Cwf_Cwc_15

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442191	Thaps261201.3, Thaps261201.5, Thaps261201.1, Thaps261201.2, Thaps261201.4

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0419

Most Highly Correlated Transcripts

bd643 (bd643) NA 0.9296	bd1934 (bd1934) NA 0.9208	269724 PP2Cc 0.9176	bd690 (bd690) NA 0.9152	4237 hypothetical protein 0.8979	21749 hypothetical protein 0.8971
263361 CHD 0.8911	11848 hypothetical protein 0.8901	262068 Lipase_3 0.8869	bd415 (bd415) arom_aa_hydroxylase superfamily 0.8867

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Cwf_Cwc_15 superfamily		Cwf15/Cwc15 cell cycle control protein; This family represents Cwf15/Cwc15 (from...	-	144.876	4.55E-42	1 - 236	superfamily	252858
Cwf_Cwc_15 superfamily		Cwf15/Cwc15 cell cycle control protein; This family represents Cwf15/Cwc15 (from...	-	144.876	4.55E-42	1 - 236	superfamily	252858

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	237901	167690	Not available	Cre24.g755447.t1.1	AT3G13200.1	346188

KEGG

KEGG description	KEGG Pathway
Spliceosome	map03040

GO Terms

Not available -

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