261275 ThylakoidFormat superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261275 chr_2 ThylakoidFormat superfamily 539138 539881 + ThylakoidFormat superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7448678 Thaps261275.2, Thaps261275.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0014

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0203
 0.30

Most Highly Correlated Transcripts

bd718

(bd718) PRK10387
0.8943

25544

(PGP) PLN02645
0.8937

22362

(KCS1) CHS_like
0.8897

261226

thylakoid lumenal 17.4 kDa protein, chloroplast precursor
0.8876

270213

(Hlip2) high light induced protein 2
0.8872

38306

Chloroa_b-bind
0.8868

38221

bPH_2
0.8863

bd1161

(bd1161) NA
0.8845

23357

PLN02779
0.8767

270308

hypothetical protein
0.8762

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ThylakoidFormat superfamily Thylakoid formation protein; THF1 is localized to the outer plastid membrane and the stroma. THF1... - 78.0562 6.21E-18 17 - 212 superfamily 264568

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_37959 PHATRDRAFT_37959 271638 154405 Not available Cre13.g562850.t1.2 AT2G20890.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments