261327 NADB_Rossmann superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261327 chr_2 NADB_Rossmann superfamily 797357 798518 + NADB_Rossmann superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7450220 Thaps261327.1, Thaps261327.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0082

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0155
 0.30

Most Highly Correlated Transcripts

bd1081

(bd1081) NA
0.9524

bd1214

(bd1214) KISc_C_terminal
0.9474

bd950

(bd950) NA
0.9464

bd439

(bd439) POLBc_alpha
0.9444

2376

PTZ00298
0.9416

bd843

(bd843) NA
0.9332

bd1983

(bd1983) RecA-like_NTPases superfamily
0.9322

bd1173

(bd1173) S_TKc
0.9299

7206

hypothetical protein
0.9292

bd463

(bd463) Aa_trans superfamily
0.9246

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 140.817 3.18E-39 89 - 277 superfamily 263925
adh_short short chain dehydrogenase; This family contains a wide variety of dehydrogenases. - 74.1254 4.93E-16 91 - 251 multi-dom 249592

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_51560 PHATRDRAFT_51560 199964 237544 444454 Cre09.g392430.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008152 GO:0016491 GO:0000252 GO:0000253 GO:0004448 GO:0004495 GO:0008875 GO:0016229 GO:0016616 GO:0018451 GO:0018452 GO:0018453 GO:0048258 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0000252

C-3 sterol dehydrogenase (C-4 sterol decarboxylase) activity

Details: 
Catalysis of the reaction: 3-beta-hydroxy-4-beta-methyl-5-alpha-cholesta-8,24-dien-4-alpha-carboxylate + NAD(P)+ = 4-alpha-methyl-5-alpha-cholesta-8,24-dien-3-one + CO2 + NAD(P)H.
GO Category: 
MF

GO:0000253

3-keto sterol reductase activity

Details: 
Catalysis of the reaction: a 3-beta-hydroxyl sterol + NADP+ = a 3-keto sterol + NADPH + H(+).
GO Category: 
MF

GO:0004448

isocitrate dehydrogenase activity

Details: 
Catalysis of the reaction: isocitrate + acceptor = 2-oxoglutarate + CO2 + reduced acceptor.
GO Category: 
MF

GO:0004495

mevaldate reductase activity

Details: 
Catalysis of the reaction: (R)-mevalonate + acceptor = mevaldate + reduced acceptor.
GO Category: 
MF

GO:0008875

gluconate dehydrogenase activity

Details: 
Catalysis of the reaction: D-gluconate + NADP+ = dehydro-D-gluconate + NADPH + H+.
GO Category: 
MF

GO:0016229

steroid dehydrogenase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction in which one substrate is a sterol derivative.
GO Category: 
MF

GO:0016616

oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor

Details: 
Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces NAD+ or NADP.
GO Category: 
MF

GO:0018451

epoxide dehydrogenase activity

Details: 
Catalysis of the reaction: ethene oxide + NAD+ + CoA-SH = NADH + H+ + acetyl-CoA.
GO Category: 
MF

GO:0018452

5-exo-hydroxycamphor dehydrogenase activity

Details: 
Catalysis of the reaction: 5-exo-hydroxycamphor + NAD+ = NADH + H+ + 2,5-diketocamphane.
GO Category: 
MF

GO:0018453

2-hydroxytetrahydrofuran dehydrogenase activity

Details: 
Catalysis of the reaction: 2-hydroxytetrahydrofuran = 2 H+ + 2 e- + butyrolactone.
GO Category: 
MF

GO:0048258

3-ketoglucose-reductase activity

Details: 
Catalysis of the reaction: NADP+ + 3-dehydro-alpha-D-glucose = NADPH + alpha-D-glucose.
GO Category: 
MF

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