261582 PKCI_related
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261582 chr_2 PKCI_related 2309461 2310825 - PKCI_related

Synonyms

NCBI ID Ensembl Genomes exon ID
7452913 Thaps261582.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0013

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0130
 0.40

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9092

263848

Voltage_gated_ClC superfamily
0.8486

24124

hypothetical protein
0.8396

21620

AAT_I superfamily
0.835

9262

hypothetical protein
0.8349

23904

hypothetical protein
0.8232

bd1788

(bd1788) NA
0.8229

11299

hypothetical protein
0.8217

260914

MFS
0.8191

262744

hypothetical protein
0.8171

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PKCI_related Protein Kinase C Interacting protein related (PKCI): PKCI and related proteins belong to the... cl00228 149.635 1.61E-43 341 - 446 specific 238607
HIT_like superfamily HIT family: HIT (Histidine triad) proteins, named for a motif related to the sequence HxHxH/Qxx (x... - 149.635 1.61E-43 341 - 446 superfamily 260280
GST_C_family C-terminal, alpha helical domain of the Glutathione S-transferase family; Glutathione S-transferase... cl02776 59.0495 6.60E-11 197 - 295 specific 198286
GST_C_family superfamily C-terminal, alpha helical domain of the Glutathione S-transferase family; Glutathione S-transferase... - 59.0495 6.60E-11 197 - 295 superfamily 261442
Gst Glutathione S-transferase [Posttranslational modification, protein turnover, chaperones] - 96.8025 2.21E-23 99 - 299 multi-dom 223698

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments