21620 AAT_I superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
21620	chr_3	AAT_I superfamily	260847	262093	-	AAT_I superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7441729	Thaps21620.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0006

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0244	0.36	0.00000032 0.014

Most Highly Correlated Transcripts

264773 ABCG_PDR_domain2 0.8696	264361 pepN 0.8627	7840 hypothetical protein 0.8527	263007 hypothetical protein 0.8522	269395 hypothetical protein 0.8482	11613 hypothetical protein 0.8473
263653 P-ATPase-V 0.84	9262 hypothetical protein 0.8376	261582 PKCI_related 0.835	13909 EHD 0.8323

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AAT_I superfamily		Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent...	-	93.1096	5.12E-22	116 - 326	superfamily	267298

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_50097	PHATRDRAFT_50097	247041	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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