261769 GDA1_CD39 superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
261769	chr_3	GDA1_CD39 superfamily	885497	886260	-	GDA1_CD39 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444763	Thaps261769.1, Thaps261769.4, Thaps261769.3, Thaps261769.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0294

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0196	0.36	0.00000075 0.45

Most Highly Correlated Transcripts

3189 hypothetical protein 0.8839	263987 hypothetical protein 0.8837	262826 DUF3608 superfamily 0.8794	33984 PKc_like superfamily 0.8785	993 PROCN superfamily 0.8737	30950 Glyco_hydro_47 0.8733
33225 MYSc 0.867	35929 (MAPKKK) S_TKc 0.8652	bd1251 (bd1251) rps18 0.8642	12500 SNF2_N 0.863

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
GDA1_CD39 superfamily		GDA1/CD39 (nucleoside phosphatase) family; GDA1/CD39 (nucleoside phosphatase) family.	-	104.008	4.45E-27	1 - 156	superfamily	266822

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_45377	PHATRDRAFT_45377	178727	327312	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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