262009 alpha_CA superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262009 chr_4 alpha_CA superfamily 113364 113810 + alpha_CA superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7446728 Thaps262009.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0082

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0143
 0.26

Most Highly Correlated Transcripts

bd1173

(bd1173) S_TKc
0.9757

bd1983

(bd1983) RecA-like_NTPases superfamily
0.9713

bd1081

(bd1081) NA
0.9684

bd1214

(bd1214) KISc_C_terminal
0.9584

bd439

(bd439) POLBc_alpha
0.957

bd950

(bd950) NA
0.953

3124

Cnd2 superfamily
0.9352

5867

CDC6
0.9335

35387

(cdc2) PKc_like superfamily
0.9261

35310

KISc_C_terminal
0.9218

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
alpha_CA superfamily Carbonic anhydrase alpha (vertebrate-like) group. Carbonic anhydrases (CAs) are zinc-containing... - 72.3155 1.77E-16 24 - 97 superfamily 260137

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004089 GO:0006730 GO:0008270 -

GO:0004089

carbonate dehydratase activity

Details: 
Catalysis of the reaction: H2CO3 = CO2 + H2O.
GO Category: 
MF

GO:0006730

one-carbon metabolic process

Details: 
The chemical reactions and pathways involving the transfer of one-carbon units in various oxidation states.
GO Category: 
BP

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

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