262179 TTL
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262179 chr_4 TTL 1163141 1165204 - TTL

Synonyms

NCBI ID Ensembl Genomes exon ID
7447967 Thaps262179.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0337

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0038
 0.59

Most Highly Correlated Transcripts

bd884

(bd884) NA
0.8915

bd850

(bd850) NA
0.854

bd1935

(bd1935) NA
0.8415

270222

0.8042

bd1954

(bd1954) NA
0.7937

bd885

(bd885) NA
0.7788

bd833

(bd833) NA
0.7645

8700

hypothetical protein
0.7535

bd1058

(bd1058) NA
0.7419

bd694

(bd694) NA
0.723

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TTL superfamily Tubulin-tyrosine ligase family; Tubulins and microtubules are subjected to several post-... - 244.535 8.19E-75 48 - 340 superfamily 251749
TTL superfamily Tubulin-tyrosine ligase family; Tubulins and microtubules are subjected to several post-... - 244.535 8.19E-75 48 - 340 superfamily 251749

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_42815 PHATRDRAFT_42815 Not available Not available 42614 Cre02.g146650.t1.1 Not available 308885

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004835 GO:0006464 -

GO:0004835

tubulin-tyrosine ligase activity

Details: 
Catalysis of the reaction: ATP + detyrosinated alpha-tubulin + L-tyrosine = alpha-tubulin + ADP + phosphate.
GO Category: 
MF

GO:0006464

cellular protein modification process

Details: 
The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications) occurring at the level of an individual cell. Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).
GO Category: 
BP

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