262236 2A0303
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262236 chr_4 2A0303 1552628 1554355 - 2A0303

Synonyms

NCBI ID Ensembl Genomes exon ID
7448856 Thaps262236.2, Thaps262236.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0416

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0150
 0.38

Most Highly Correlated Transcripts

13448

Sec1
0.9131

2660

hypothetical protein
0.8996

21090

hypothetical protein
0.8969

22957

hypothetical protein
0.8968

11307

ABC_ATPase superfamily
0.8933

1244

hypothetical protein
0.8903

20662

CactinC_cactus
0.8885

5256

hypothetical protein
0.8867

20979

hypothetical protein
0.885

21220

KU superfamily
0.8842

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
2A0303 cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and... - 243.954 8.33E-73 27 - 503 multi-dom 129984

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 278891 Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005279 GO:0006865 GO:0016020 GO:0006810 -

GO:0005279

NA

Details: 
NA
GO Category: 
NA

GO:0006865

amino acid transport

Details: 
The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

Add comment

Log in to post comments